Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

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Showing 1-100 of 174 items.

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Berry size (berry weight)	Be size	18	25.9	SCC8	MTP2223-27	x	MTP2121-30		V. VINIFERA	DOLIGEZ et al. (2002)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Berry size (berry weight)	Be size	18			RUBY SEEDLESS	x	THOMPSON SEEDLESS			MEJIA et al. (2007)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Linalool content	Lin	10		cnd41	ITALIA	x	BIG PERLON		V. VINIFERA	BATTILANA et al. (2009)
Linalool content	Lin	10	1.2	VVIH01	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Linalool content	Lin	10	1.4	VrZAG67	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Linalool content	Lin	10	1.3	VrZAG64	MUSCAT OTTONEL	x	MUSCAT OTTONEL		V. VINIFERA	DUCHENE et al. (2009)
Linalool content	Lin	10	1.1	VMC3d7	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	ITALIA	x	BIG PERLON		V. VINIFERA	BATTILANA et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	MUSCAT OTTONEL	x	MUSCAT OTTONEL		V. VINIFERA	DUCHENE et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Berry skin color	BeCo	2	8.2	VMC5g7	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Berry skin color	BeCo	2	17.5	VMC8c2	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Berry skin color	BeCo	2	14.2	MybA1					V. VINIFERA	KOBAYASHI et al. (2004)
Pierce’s disease	Pdr1	14	25.3	VMCNg3h8	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2006)
Pierce’s disease	Pdr1	14	26.6	VVIn64	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2008)
Pierce’s disease	Pdr1	14	26.1	UDV095						RIAZ et al. (2008)
Daktulosphaira vitifoliae	Rdv5	5			MN1264	x	MN1246			CLARK et al. (2018)	root resistance
Plasmopara viticola	Rpv16									PAP et al. (IN PREPARATION)
Plasmopara viticola	Rpv22									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv23									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv24									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv28
Erysiphe necator	Ren3	15	10.9	GF15-28 / VViv67	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18	13.2	UDV117	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Seed development inhibitor	SdI	18	25.9	SCC8	MTP2223-27	x	MTP2121-30			DOLIGEZ et al. (2002)
Sex	Sex	2	3.7	VVMD34	HORIZON	x	ILLINOIS 547-1			DALBO et al. (2000)
Sex	Sex	2	4.2	VVS3	RAMSEY	x	RIPARIA GLOIRE
Sex	Sex	2	4.9	VVIb23	V. RUPESTRIS	x	V. ARIZONICA			RIAZ et al. (2006)
Sex	Sex	2	5.0	APT3	GF.V3125	x	BOERNER			FECHTER et al. (2012)
Sex	Sex	2	4.7	SNP4C_1	MOSCATO BIANCO	x	V. RIPARIA WR63			BATTILANA et al. (2013)
Sex	Sex	2	4.9	Vvib23	MUSCAT OTTONEL	x	MALVASIA AROMATICA DI CANDIA			BATTILANA et al. (2013)
Sex	Sex	2	4.9	VSVV007						PICQ et al. (2014)
Sex	Sex	2	5.0	VSVV010						PICQ et al. (2014)
Veraison	Ver	16	13.7	VMC1E11	ITALIA	x	BIG PERLON			COSTANTINI et al. (2008)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver2	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Xiphinema index	XiR1	19	20.9	VMC5a10	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	XU et al. (2008)
Xiphinema index	XiR1	19	20.9	1N2R3b	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Xiphinema index	XiR1	19		M4F3R	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Plasmopara viticola	Rpv12	14	9.3	UDV304	CABERNET SAUVIGNON	x	20/3	20/3	V. AMURENSIS	VENUTI et al. (2013)
Plasmopara viticola	Rpv12	14		rgvvin180	CABERNET SAUVIGNON	x	20/3	20/3		VENUTI et al. (2013)
Plasmopara viticola	Rpv12	14	10.1	UDV370	CABERNET SAUVIGNON	x	20/3	20/3		VENUTI et al. (2013)
Plasmopara viticola	Rpv1	12	10.3	VVIb32	SYRAH	x	28-8-78	28-8-78	M. ROTUNDIFOLIA	MERDINOGLU et al. (2003)
Plasmopara viticola	Rpv2	18			CABERNET SAUVIGNON	x	8624	8624	M. ROTUNDIFOLIA	WIEDEMANN-MERDINOGLU et al. (2006)
Plasmopara viticola	Rpv12	14	8.0	UDV014	99-1-48	x	PINOT NOIR	99-1-48	V. AMURENSIS	VENUTI et al. (2013)
Berry size (berry weight)	Be size	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Seedlessness	SdI	18	23.2	VMC6f11	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seedlessness	SdI	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Plasmopara viticola	Rpv3^null-287	18	24.9	UDV305				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^null-287	18	26.1	UDV737				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3	18	24.9	UDV305	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv7	7	11.4	UDV097	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)
Plasmopara viticola	Rpv11	5		CS1E104J11F	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)
Berry size (berry weight)	Be size	18			ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Seed development inhibitor	SdI	18	26.9	VMC7f2	ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)
Daktulosphaira vitifoliae	Rdv1	13	21.9	GF13-9	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Daktulosphaira vitifoliae	Rdv1	13	22.5	VMC8e6	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Daktulosphaira vitifoliae	Rdv1	13		GF13-1	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	HAUSMANN et al. (2011)
Daktulosphaira vitifoliae	Rdv1	13	21.5	GF13-7	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	HAUSMANN et al. (2011)
Plasmopara viticola	Rpv14	5	20.2	GF05-13	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	OCHSSNER et al. (2016)
Guignardia bidwellii	Rgb1	14	26.7	GF14-42	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Guignardia bidwellii	Rgb2	16	15.3	VChr16c	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Erysiphe necator	Ren4	18	26.9	VMC7f2	C166-043	x	F8909-08	C166-043	V. ROMANETTI	RIAZ et al. (2011)
Meloidogyne javanica (root knot nematode)	MjR1	18	31.2	S18_31160355	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	34.0	S18_33954011	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Erysiphe necator	Ren4	18	26.9	SNPs	C87-41	x	B70-57	C87-41	V. ROMANETTI	MAHANIL et al. (2012)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	x	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	CABERNET SAUVIGNON		DUNLEVY et al. (2013)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	CABERNET SAUVIGNON		GUILLAUMIE et al. (2013)	3 significant QTLs for IBMP content
Erysiphe necator	Sen1	9	13.6 - 18.0	S8_19258484	V. RUPESTRIS B38	x	CHARDONNAY	CHARDONNAY	V. VINIFERA	BARBA et al. (2014)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver1	16		SNP1092P11R	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Plasmopara viticola	Rpv5	9	4.0	VVIo52b	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Plasmopara viticola	Rpv6	12	20.4	VMC8G9	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.2	VVMD7	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.8	VrZAG62	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	3.1	VVIB22	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_3127568	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_1912889	HORIZON	x	ILLINOIS 547-1	HORIZON		BARBA et al. (2018)
Plasmopara viticola	Rpv17	8	11.7		V. RUPESTRIS B38	x	HORIZON	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv18	11	15.4		V. RUPESTRIS B38	x	HORIZON	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv20	6	0.9		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv21	7	2.1		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.3	S15_19300044	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1	V. CINEREA	BARBA et al. (2018)
Erysiphe necator	Ren2	14	26.9	CS25	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1		DALBO et al. (2001)
Erysiphe necator	Ren1	13		UDV020	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren1	13	18.4	VMC9h4-2	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren1	13	18.4	VMCNg4e10.1	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Agrobacterium spec.	Rcg1	15	7.1	UDV015	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Agrobacterium spec.	Rcg1	15	9.3	9M3-3	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	resistant tissue: Cane
Erysiphe (Uncinula) necator	Run2.1	18	20.9	VMCNg1e3	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	A90-71	x	FLAME SEEDLESS	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Leaf, Cane, Rachis, Fruit

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics