Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Sex	Sex	2	4.2	VVS3	RAMSEY	x	RIPARIA GLOIRE
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	x	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	CABERNET SAUVIGNON		DUNLEVY et al. (2013)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	CABERNET SAUVIGNON		GUILLAUMIE et al. (2013)	3 significant QTLs for IBMP content
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.2	VVMD7	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Sex	Sex	2	3.7	VVMD34	HORIZON	x	ILLINOIS 547-1			DALBO et al. (2000)
Plasmopara viticola	Rpv11	5	4.5	VVMD27	REGENT	x	LEMBERGER	REGENT		FISCHER et al. (2004)
Erysiphe necator	Ren3	15	10.9	VViv67	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Erysiphe necator	Ren7	19	0.2	VVIp17.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Plasmopara viticola	Rpv5	9	4.0	VVIo52b	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Pierce’s disease	Pdr1	14	26.6	VVIn64	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2008)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	23.4	VVIN16	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Linalool content	Lin	10	1.2	VVIH01	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Plasmopara viticola	Rpv1	12	10.3	VVIb32	SYRAH	x	28-8-78	28-8-78	M. ROTUNDIFOLIA	MERDINOGLU et al. (2003)
Sex	Sex	2	4.9	VVIb23	V. RUPESTRIS	x	V. ARIZONICA			RIAZ et al. (2006)
Sex	Sex	2	4.9	Vvib23	MUSCAT OTTONEL	x	MALVASIA AROMATICA DI CANDIA			BATTILANA et al. (2013)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	3.1	VVIB22	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Plasmopara viticola	Rpv27	18	24.6	VVCS1H077H16R1-1	NORTON	x	CABERNET SAUVIGNON	NORTON	V. AESTIVALIS	SAPKOTA et al. (2019)
Xiphinema index	XiR2	9		VVBX-A-06	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Sex	Sex	2	5.0	VSVV010						PICQ et al. (2014)
Sex	Sex	2	4.9	VSVV007						PICQ et al. (2014)
Linalool content	Lin	10	1.4	VrZAG67	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Linalool content	Lin	10	1.3	VrZAG64	MUSCAT OTTONEL	x	MUSCAT OTTONEL		V. VINIFERA	DUCHENE et al. (2009)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.8	VrZAG62	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Erysiphe necator	Ren1	13	18.4	VMCNg4e10.1	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Pierce’s disease	Pdr1	14	25.3	VMCNg3h8	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2006)
Plasmopara viticola	Rpv4	4	5.2	VMCNg2e1	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Erysiphe (Uncinula) necator	Run2.1	18	20.9	VMCNg1e3	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe necator	Ren1	13	18.4	VMC9h4-2	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren5	14	4.8	VMC9c1	REGALE	x	REGALE	REGALE	M. ROTUNDIFOLIA	BLANC et al. (2012)
Erysiphe necator	Ren7	19	0.9	VMC9a2.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Plasmopara viticola	Rpv6	12	20.4	VMC8G9	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Erysiphe (Uncinula) necator	Run1	12	20.4	VMC8g9	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	BARKER et al. (2005)	powdery mildew resistance originating from Muscaninia should be named as Run...
Daktulosphaira vitifoliae	Rdv1	13	22.5	VMC8e6	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Berry skin color	BeCo	2	17.5	VMC8c2	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Plasmopara viticola	Rpv4	4	4.7	VMC7h3	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Berry size (berry weight)	Be size	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	REGENT	x	RED GLOBE	REGENT		VAN HEERDEN et al. (2014)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Erysiphe necator	Ren4	18	26.9	VMC7f2	C166-043	x	F8909-08	C166-043	V. ROMANETTI	RIAZ et al. (2011)
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	resistant tissue: Cane
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	A90-71	x	FLAME SEEDLESS	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Leaf, Cane, Rachis, Fruit
Erysiphe (Uncinula) necator	Run2.2	18	26.9	VMC7f2	e2-9	x	MALAGA ROSADA	TRAYSHED	M. ROTUNDIFOLIA	RIAZ et al. (2011)
Seedlessness	SdI	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seed development inhibitor	SdI	18	26.9	VMC7f2	ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)
Seedlessness	SdI	18	23.2	VMC6f11	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Berry skin color	BeCo	2	8.2	VMC5g7	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Xiphinema index	XiR1	19	20.9	VMC5a10	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	XU et al. (2008)
Erysiphe (Uncinula) necator	Run1	12	13.1	VMC4f3.1	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	BARKER et al. (2005)	powdery mildew resistance originating from Muscaninia should be named as Run...
Linalool content	Lin	10	1.1	VMC3d7	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Fleshless berry	Flb	18	0.9	VMC2A3	CHARDONNAY	x	UGNI BLANC MUTANT	UGNI BLANC	V. VINIFERA	FERNANDEZ et al. (2006)	Mutant
Plasmopara viticola	Rpv13	12	10.0	VMC1G3.2	MOSCATO BIANCO	x	V. RIPARIA W63	V. RIPARIA W63	V. RIPARIA	MOREIRA et al. (2011)
Veraison	Ver	16	13.7	VMC1E11	REGENT	x	LEMBERGER	REGENT		FISCHER et al. (2004)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver	16	13.7	VMC1E11	ITALIA	x	BIG PERLON			COSTANTINI et al. (2008)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Guignardia bidwellii	Rgb2	16	15.3	VChr16c	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Erysiphe necator	Ren3	15	4.9	VChr15CenGen02	REGENT	x	RED GLOBE	REGENT		VAN HEERDEN et al. (2014)
Plasmopara viticola	Rpv11	5	4.1	VCHR05C	GF.GA-52-42	x	SOLARIS	SOLARIS		SCHWANDER et al. (2012)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.1	UDV737				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.1	UDV737				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Plasmopara viticola	Rpv3^321-312	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	26.1	UDV737				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv27	18	26.0	UDV737	NORTON	x	CABERNET SAUVIGNON	NORTON	V. AESTIVALIS	SAPKOTA et al. (2019)
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Plasmopara viticola	Rpv12	14	10.1	UDV370	CABERNET SAUVIGNON	x	20/3	20/3		VENUTI et al. (2013)
Plasmopara viticola	Rpv3	18	24.9	UDV305	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	24.9	UDV305				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	24.9	UDV305				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^321-312	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	24.9	UDV305				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv12	14	9.3	UDV304	CABERNET SAUVIGNON	x	20/3	20/3	V. AMURENSIS	VENUTI et al. (2013)
Erysiphe necator	Ren8	18	13.2	UDV117	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3	18		UDV112	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Xiphinema index	XiR4	18	29.1	UDV108	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Plasmopara viticola	Rpv7	7	11.4	UDV097	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)
Pierce’s disease	Pdr1	14	26.1	UDV095						RIAZ et al. (2008)
Erysiphe necator	Ren1	13		UDV020	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren3	15	7.1	UDV015b	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Agrobacterium spec.	Rcg1	15	7.1	UDV015	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Plasmopara viticola	Rpv12	14	8.0	UDV014	99-1-48	x	PINOT NOIR	99-1-48	V. AMURENSIS	VENUTI et al. (2013)
Erysiphe necator	Ren8	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Veraison	Ver2	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Erysiphe necator	Ren4	18	26.9	SNPs	C87-41	x	B70-57	C87-41	V. ROMANETTI	MAHANIL et al. (2012)
Sex	Sex	2	4.7	SNP4C_1	MOSCATO BIANCO	x	V. RIPARIA WR63			BATTILANA et al. (2013)
Veraison	Ver1	16		SNP1092P11R	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Erysiphe necator	Ren3	15		ScORA7-760	REGENT	x	LEMBERGER	REGENT		AKKURT et al. (2007)
Berry size (berry weight)	Be size	18	25.9	SCC8	MTP2223-27	x	MTP2121-30		V. VINIFERA	DOLIGEZ et al. (2002)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Seed development inhibitor	SdI	18	25.9	SCC8	MTP2223-27	x	MTP2121-30			DOLIGEZ et al. (2002)
Xiphinema index	XiR3	10		SC8-03	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Erysiphe necator	Sen1	9	13.6 - 18.0	S8_19258484	V. RUPESTRIS B38	x	CHARDONNAY	CHARDONNAY	V. VINIFERA	BARBA et al. (2014)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_3127568	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_1912889	HORIZON	x	ILLINOIS 547-1	HORIZON		BARBA et al. (2018)
Erysiphe necator	Ren10	2	17.9	S2_17854965	MN1264	x	MN1214	SEYVAL BLANC		TEH et al. (2017)

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics