Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

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Showing 1-100 of 174 items.

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Berry skin color	BeCo	2	14.2	MybA1					V. VINIFERA	KOBAYASHI et al. (2004)
Pierce’s disease	Pdr1	14	26.1	UDV095						RIAZ et al. (2008)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	24.9	UDV305				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.1	UDV737				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	24.9	UDV305				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.1	UDV737				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^321-312	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^321-312	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^361-299	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^299-314	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	24.9	UDV305				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^null-287	18	26.1	UDV737				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv16									PAP et al. (IN PREPARATION)
Plasmopara viticola	Rpv22									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv23									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv24									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv28
Sex	Sex	2	4.9	VSVV007						PICQ et al. (2014)
Sex	Sex	2	5.0	VSVV010						PICQ et al. (2014)
GA insensitive dwarf mutant	Vvgai1	1	4.9					PINOT MEUNIER
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	x	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	CABERNET SAUVIGNON		DUNLEVY et al. (2013)
Plasmopara viticola	Rpv12	14	8.0	UDV014	99-1-48	x	PINOT NOIR	99-1-48	V. AMURENSIS	VENUTI et al. (2013)
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	A90-71	x	FLAME SEEDLESS	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Leaf, Cane, Rachis, Fruit
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe necator	Ren4	18	26.9	VMC7f2	C166-043	x	F8909-08	C166-043	V. ROMANETTI	RIAZ et al. (2011)
Meloidogyne javanica (root knot nematode)	MjR1	18	31.2	S18_31160355	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	34.0	S18_33954011	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Erysiphe necator	Ren4	18	26.9	SNPs	C87-41	x	B70-57	C87-41	V. ROMANETTI	MAHANIL et al. (2012)
Plasmopara viticola	Rpv2	18			CABERNET SAUVIGNON	x	8624	8624	M. ROTUNDIFOLIA	WIEDEMANN-MERDINOGLU et al. (2006)
Plasmopara viticola	Rpv5	9	4.0	VVIo52b	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Plasmopara viticola	Rpv6	12	20.4	VMC8G9	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Plasmopara viticola	Rpv12	14	9.3	UDV304	CABERNET SAUVIGNON	x	20/3	20/3	V. AMURENSIS	VENUTI et al. (2013)
Plasmopara viticola	Rpv12	14		rgvvin180	CABERNET SAUVIGNON	x	20/3	20/3		VENUTI et al. (2013)
Plasmopara viticola	Rpv12	14	10.1	UDV370	CABERNET SAUVIGNON	x	20/3	20/3		VENUTI et al. (2013)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	CABERNET SAUVIGNON		GUILLAUMIE et al. (2013)	3 significant QTLs for IBMP content
Colletotrichum gloeosporioides (Glomerella cingulata)	CgR1	14	4.1	np19345	CABERNET SAUVIGNON	x	SHUANGHONG	SHUANGHONG	V. AMURENSIS	FU et al. (2019)	ripe rot
Fleshless berry	Flb	18	0.9	VMC2A3	CHARDONNAY	x	UGNI BLANC MUTANT	UGNI BLANC	V. VINIFERA	FERNANDEZ et al. (2006)	Mutant
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.6	S15_19560016	CHARDONNAY	x	V. CINEREA B9	V. CINEREA B9	V. CINEREA	BARBA et al. (2018)
Plasmopara viticola	Rpv3	18	24.9	UDV305	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv7	7	11.4	UDV097	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)
Plasmopara viticola	Rpv11	5		CS1E104J11F	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)
Berry size (berry weight)	Be size	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Seedlessness	SdI	18	23.2	VMC6f11	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seedlessness	SdI	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Erysiphe (Uncinula) necator	Run2.2	18	26.9	VMC7f2	e2-9	x	MALAGA ROSADA	TRAYSHED	M. ROTUNDIFOLIA	RIAZ et al. (2011)
Erysiphe necator	Ren6	9	8.6	PN9-057	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren6	9	9.1	PN9-068	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren7	19	0.2	VVIp17.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren7	19	0.9	VMC9a2.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Linalool content	Lin	10	1.1	VMC3d7	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Erysiphe necator	Ren3	15	10.9	GF15-28 / VViv67	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18	13.2	UDV117	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver1	16		SNP1092P11R	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver2	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Plasmopara viticola	Rpv10	9	3.7	GF09-46	GF.GA-52-42	x	SOLARIS	SOLARIS	V. AMURENSIS	SCHWANDER et al. (2012)
Plasmopara viticola	Rpv11	5	4.1	VCHR05C	GF.GA-52-42	x	SOLARIS	SOLARIS		SCHWANDER et al. (2012)
Daktulosphaira vitifoliae	Rdv1	13	21.9	GF13-9	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Daktulosphaira vitifoliae	Rdv1	13	22.5	VMC8e6	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Daktulosphaira vitifoliae	Rdv1	13		GF13-1	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	HAUSMANN et al. (2011)
Daktulosphaira vitifoliae	Rdv1	13	21.5	GF13-7	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	HAUSMANN et al. (2011)
Plasmopara viticola	Rpv14	5	20.2	GF05-13	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	OCHSSNER et al. (2016)
Guignardia bidwellii	Rgb1	14	26.7	GF14-42	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Guignardia bidwellii	Rgb2	16	15.3	VChr16c	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Sex	Sex	2	5.0	APT3	GF.V3125	x	BOERNER			FECHTER et al. (2012)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15		S15_19591538	HORIZON	x	V. CINEREA B9	V. CINEREA B9	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.3	S15_19300044	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.2	VVMD7	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.8	VrZAG62	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	3.1	VVIB22	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_3127568	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_1912889	HORIZON	x	ILLINOIS 547-1	HORIZON		BARBA et al. (2018)
Plasmopara viticola	Rpv20	6	0.9		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv21	7	2.1		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Erysiphe necator	Ren2	14	26.9	CS25	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1		DALBO et al. (2001)
Sex	Sex	2	3.7	VVMD34	HORIZON	x	ILLINOIS 547-1			DALBO et al. (2000)
Berry size (berry weight)	Be size	18			ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Linalool content	Lin	10		cnd41	ITALIA	x	BIG PERLON		V. VINIFERA	BATTILANA et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	ITALIA	x	BIG PERLON		V. VINIFERA	BATTILANA et al. (2009)
Seed development inhibitor	SdI	18	26.9	VMC7f2	ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)
Veraison	Ver	16	13.7	VMC1E11	ITALIA	x	BIG PERLON			COSTANTINI et al. (2008)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	resistant tissue: Cane
Erysiphe (Uncinula) necator	Run2.1	18	20.9	VMCNg1e3	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Agrobacterium spec.	Rcg1	15	7.1	UDV015	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Agrobacterium spec.	Rcg1	15	9.3	9M3-3	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	23.4	VVIN16	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics