Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

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Showing 1-100 of 174 items.

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Erysiphe necator	Ren3	15	10.9	GF15-28 / VViv67	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18	13.2	UDV117	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren8	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver1	16		SNP1092P11R	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver2	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Sex	Sex	2	4.7	SNP4C_1	MOSCATO BIANCO	x	V. RIPARIA WR63			BATTILANA et al. (2013)
Plasmopara viticola	Rpv9	7	16.6	CCoAOMT	MOSCATO BIANCO	x	V. RIPARIA W63	V. RIPARIA W63	V. RIPARIA	MOREIRA et al. (2011)	CCoAOMT is the candidate gene from which the marker IN0006 was derived
Plasmopara viticola	Rpv13	12	10.0	VMC1G3.2	MOSCATO BIANCO	x	V. RIPARIA W63	V. RIPARIA W63	V. RIPARIA	MOREIRA et al. (2011)
Linalool content	Lin	10	1.2	VVIH01	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Linalool content	Lin	10	1.4	VrZAG67	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	MOSCATO BIANCO	x	V. RIPARIA			BATTILANA et al. (2009)
Erysiphe necator	Ren6	9	8.6	PN9-057	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren6	9	9.1	PN9-068	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren7	19	0.2	VVIp17.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Erysiphe necator	Ren7	19	0.9	VMC9a2.1	F2-35	x	V. PIASEZKII (DVIT2027)	V. PIASEZKII (DVIT2027)	V. PIASEZKII	PAP et al. (2016)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.6	S15_19560016	CHARDONNAY	x	V. CINEREA B9	V. CINEREA B9	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15		S15_19591538	HORIZON	x	V. CINEREA B9	V. CINEREA B9	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.2	VVMD7	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	1.8	VrZAG62	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7	3.1	VVIB22	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_3127568	HORIZON	x	V. CINEREA B9	HORIZON		BARBA et al. (2018)
Plasmopara viticola	Rpv20	6	0.9		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv21	7	2.1		HORIZON	x	V. CINEREA B9	HORIZON		DIVILOV et al. (2018)
Pierce’s disease	Pdr1	14	25.3	VMCNg3h8	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2006)
Pierce’s disease	Pdr1	14	26.6	VVIn64	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2008)
Sex	Sex	2	4.9	VVIb23	V. RUPESTRIS	x	V. ARIZONICA			RIAZ et al. (2006)
Xiphinema index	XiR1	19	20.9	VMC5a10	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	XU et al. (2008)
Xiphinema index	XiR1	19	20.9	1N2R3b	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Xiphinema index	XiR1	19		M4F3R	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Plasmopara viticola	Rpv8	14	6.6	Chr14V015	V. AMURENSIS RUPRECHT	x	V. AMURENSIS RUPRECHT	V. AMURENSIS RUPRECHT	V. AMURENSIS	BLASI et al. (2011)
Fleshless berry	Flb	18	0.9	VMC2A3	CHARDONNAY	x	UGNI BLANC MUTANT	UGNI BLANC	V. VINIFERA	FERNANDEZ et al. (2006)	Mutant
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Berry size (berry weight)	Be size	18			RUBY SEEDLESS	x	THOMPSON SEEDLESS			MEJIA et al. (2007)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	23.4	VVIN16	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Plasmopara viticola	Rpv10	9	3.7	GF09-46	GF.GA-52-42	x	SOLARIS	SOLARIS	V. AMURENSIS	SCHWANDER et al. (2012)
Plasmopara viticola	Rpv11	5	4.1	VCHR05C	GF.GA-52-42	x	SOLARIS	SOLARIS		SCHWANDER et al. (2012)
Plasmopara viticola	Rpv25	15	3.0	Marker561375	RED GLOBE	x	SHUANGYOU	SHUANGYOU	V. AMURENSIS	LIN et al. (2019)
Plasmopara viticola	Rpv25	15	3.9	Marker549779	RED GLOBE	x	SHUANGYOU	SHUANGYOU	V. AMURENSIS	LIN et al. (2019)
Plasmopara viticola	Rpv26	15	14.7	Marker525926	RED GLOBE	x	SHUANGYOU	SHUANGYOU	V. AMURENSIS	LIN et al. (2019)
Plasmopara viticola	Rpv26	15	15.0	Marker526446	RED GLOBE	x	SHUANGYOU	SHUANGYOU	V. AMURENSIS	LIN et al. (2019)
Colletotrichum gloeosporioides (Glomerella cingulata)	CgR1	14	4.1	np19345	CABERNET SAUVIGNON	x	SHUANGHONG	SHUANGHONG	V. AMURENSIS	FU et al. (2019)	ripe rot
Agrobacterium spec.	Rcg1	15	7.1	UDV015	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Agrobacterium spec.	Rcg1	15	9.3	9M3-3	KUNBARAT	x	SARFEHER	KUNBARAT	V. AMURENSIS	KUCZMOG et al. (2012)	crown gall
Sex	Sex	2	4.2	VVS3	RAMSEY	x	RIPARIA GLOIRE
Daktulosphaira vitifoliae	Rdv2	14	4.9	S14_4921219	V. CINEREA C2-50	x	RIESLING	V. CINEREA C2-50	V. CINEREA	SMITH et al. (2018)	root resistance
Meloidogyne javanica (root knot nematode)	MjR1	18	31.2	S18_31160355	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	34.0	S18_33954011	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Erysiphe necator	Ren5	14	4.8	VMC9c1	REGALE	x	REGALE	REGALE	M. ROTUNDIFOLIA	BLANC et al. (2012)
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	REGENT	x	RED GLOBE	REGENT		VAN HEERDEN et al. (2014)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Erysiphe necator	Ren3	15	4.9	VChr15CenGen02	REGENT	x	RED GLOBE	REGENT		VAN HEERDEN et al. (2014)
Plasmopara viticola	Rpv12	14	8.0	UDV014	99-1-48	x	PINOT NOIR	99-1-48	V. AMURENSIS	VENUTI et al. (2013)
Linalool content	Lin	10	1.3	VrZAG64	MUSCAT OTTONEL	x	MUSCAT OTTONEL		V. VINIFERA	DUCHENE et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	MUSCAT OTTONEL	x	MUSCAT OTTONEL		V. VINIFERA	DUCHENE et al. (2009)
Berry skin color	BeCo	2	8.2	VMC5g7	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Berry skin color	BeCo	2	17.5	VMC8c2	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Berry size (berry weight)	Be size	18	25.9	SCC8	MTP2223-27	x	MTP2121-30		V. VINIFERA	DOLIGEZ et al. (2002)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Seed development inhibitor	SdI	18	25.9	SCC8	MTP2223-27	x	MTP2121-30			DOLIGEZ et al. (2002)
Daktulosphaira vitifoliae	Rdv3	14	5.0	S14_5049399	MN1264	x	MN1246	MN1264		CLARK et al. (2018)	foliar resistance
Daktulosphaira vitifoliae	Rdv4	4			MN1264	x	MN1246	MN1264		CLARK et al. (2018)	foliar resistance
Daktulosphaira vitifoliae	Rdv5	5			MN1264	x	MN1246			CLARK et al. (2018)	root resistance
Erysiphe necator	Ren10	2		Haploblock validation	MN1264	x	MN1246	SEYVAL BLANC		TEH et al. (2017)
Erysiphe necator	Ren10	2	17.9	S2_17854965	MN1264	x	MN1214	SEYVAL BLANC		TEH et al. (2017)
Sex	Sex	2	4.9	Vvib23	MUSCAT OTTONEL	x	MALVASIA AROMATICA DI CANDIA			BATTILANA et al. (2013)
Erysiphe (Uncinula) necator	Run2.2	18	26.9	VMC7f2	e2-9	x	MALAGA ROSADA	TRAYSHED	M. ROTUNDIFOLIA	RIAZ et al. (2011)
Plasmopara viticola	Rpv3	18		UDV112	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv4	4	4.7	VMC7h3	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Plasmopara viticola	Rpv4	4	5.2	VMCNg2e1	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Plasmopara viticola	Rpv11	5	4.5	VVMD27	REGENT	x	LEMBERGER	REGENT		FISCHER et al. (2004)
Erysiphe necator	Ren3	15	7.1	UDV015b	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Erysiphe necator	Ren3	15	10.9	VViv67	REGENT	x	LEMBERGER	REGENT		WELTER et al. (2007)
Erysiphe necator	Ren3	15		ScORA7-760	REGENT	x	LEMBERGER	REGENT		AKKURT et al. (2007)
Erysiphe necator	Ren3	15	9.3	GF15-42	REGENT	x	LEMBERGER	REGENT		ZENDLER et al. (2017)
Erysiphe necator	Ren9	15	1.4	CenGen6	REGENT	x	LEMBERGER	REGENT		ZENDLER et al. (2017)
Veraison	Ver	16	13.7	VMC1E11	REGENT	x	LEMBERGER	REGENT		FISCHER et al. (2004)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Anthocyanin 3,5-diglucosides	5-GT	9	6.5		REGENT	x	LEMBERGER	REGENT		HAUSMANN et al. (2009)
Anthocyanin 3,5-diglucosides	5-GT	9	6.5		REGENT	x	LEMBERGER	REGENT		JANVARY et al. (2009)
Erysiphe necator	Ren1	13		UDV020	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren1	13	18.4	VMC9h4-2	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren1	13	18.4	VMCNg4e10.1	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.3	S15_19300044	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda2	7		S7_1912889	HORIZON	x	ILLINOIS 547-1	HORIZON		BARBA et al. (2018)
Erysiphe necator	Ren2	14	26.9	CS25	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1		DALBO et al. (2001)
Sex	Sex	2	3.7	VVMD34	HORIZON	x	ILLINOIS 547-1			DALBO et al. (2000)
Plasmopara viticola	Rpv17	8	11.7		V. RUPESTRIS B38	x	HORIZON	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv18	11	15.4		V. RUPESTRIS B38	x	HORIZON	HORIZON		DIVILOV et al. (2018)
Plasmopara viticola	Rpv19	14	29.5		V. RUPESTRIS B38	x	HORIZON	V. RUPESTRIS B38	V. RUPESTRIS	DIVILOV et al. (2018)
Plasmopara viticola	Rpv5	9	4.0	VVIo52b	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Plasmopara viticola	Rpv6	12	20.4	VMC8G9	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	CABERNET SAUVIGNON		GUILLAUMIE et al. (2013)	3 significant QTLs for IBMP content
Linalool content	Lin	10	1.1	VMC3d7	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)
Monoterpene content	Mtc	5	3.8	DXS1	GEWUERZTRAMINER	x	GEWUERZTRAMINER		V. VINIFERA	DUCHENE et al. (2009)

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics