Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

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Showing 101-174 of 174 items.

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Guignardia bidwellii	Rgb2	16	15.3	VChr16c	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Plasmopara viticola	Rpv18	11	15.4		V. RUPESTRIS B38	x	HORIZON	HORIZON		DIVILOV et al. (2018)
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3176-21-11	x	CABERNET SAUVIGNON	VRH3176-21-11	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3161-6-4	x	CABERNET SAUVIGNON	VRH3161-6-4	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Plasmopara viticola	Rpv9	7	16.6	CCoAOMT	MOSCATO BIANCO	x	V. RIPARIA W63	V. RIPARIA W63	V. RIPARIA	MOREIRA et al. (2011)	CCoAOMT is the candidate gene from which the marker IN0006 was derived
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3176-21-11	x	CABERNET SAUVIGNON	VRH3176-21-11	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3161-6-4	x	CABERNET SAUVIGNON	VRH3161-6-4	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Berry skin color	BeCo	2	17.5	VMC8c2	MTP3140	x	MTP2223-27		V. VINIFERA	DOLIGEZ et al. (2002)
Erysiphe necator	Ren10	2	17.9	S2_17854965	MN1264	x	MN1214	SEYVAL BLANC		TEH et al. (2017)
Erysiphe necator	Ren1	13	18.4	VMC9h4-2	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Erysiphe necator	Ren1	13	18.4	VMCNg4e10.1	NIMRANG	x	KISHMISH VATKANA	KISHMISH VATKANA	V. VINIFERA	HOFFMANN et al. (2008)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.3	S15_19300044	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1	V. CINEREA	BARBA et al. (2018)
Diaporthe ampelina (Phomopsis viticola)	Rda1	15	19.6	S15_19560016	CHARDONNAY	x	V. CINEREA B9	V. CINEREA B9	V. CINEREA	BARBA et al. (2018)
Plasmopara viticola	Rpv14	5	20.2	GF05-13	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	OCHSSNER et al. (2016)
Plasmopara viticola	Rpv6	12	20.4	VMC8G9	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	GLOIRE DE MONTPELLIER	V. RIPARIA	MARGUERIT et al. (2009)
Erysiphe (Uncinula) necator	Run1	12	20.4	VMC8g9	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	BARKER et al. (2005)	powdery mildew resistance originating from Muscaninia should be named as Run...
Erysiphe (Uncinula) necator	Run2.1	18	20.9	VMCNg1e3	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Xiphinema index	XiR1	19	20.9	VMC5a10	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	XU et al. (2008)
Xiphinema index	XiR1	19	20.9	1N2R3b	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Daktulosphaira vitifoliae	Rdv1	13	21.5	GF13-7	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	HAUSMANN et al. (2011)
Daktulosphaira vitifoliae	Rdv1	13	21.9	GF13-9	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Daktulosphaira vitifoliae	Rdv1	13	22.5	VMC8e6	GF.V3125	x	BOERNER	BOERNER	V. CINEREA	ZHANG et al. (2009)
Seedlessness	SdI	18	23.2	VMC6f11	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	23.4	VVIN16	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Plasmopara viticola	Rpv27	18	24.6	VVCS1H077H16R1-1	NORTON	x	CABERNET SAUVIGNON	NORTON	V. AESTIVALIS	SAPKOTA et al. (2019)
Plasmopara viticola	Rpv3	18	24.9	UDV305	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	24.9	UDV305				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	24.9	UDV305				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^321-312	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	24.9	UDV305				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Pierce’s disease	Pdr1	14	25.3	VMCNg3h8	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2006)
Berry size (berry weight)	Be size	18	25.9	SCC8	MTP2223-27	x	MTP2121-30		V. VINIFERA	DOLIGEZ et al. (2002)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	25.9	GF18-06	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Seed development inhibitor	SdI	18	25.9	SCC8	MTP2223-27	x	MTP2121-30			DOLIGEZ et al. (2002)
Plasmopara viticola	Rpv27	18	26.0	UDV737	NORTON	x	CABERNET SAUVIGNON	NORTON	V. AESTIVALIS	SAPKOTA et al. (2019)
Pierce’s disease	Pdr1	14	26.1	UDV095						RIAZ et al. (2008)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.1	UDV737				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.1	UDV737				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737	MERZLING	x	TEROLDEGO	MERZLING		VEZZULLI et al. (2019)
Plasmopara viticola	Rpv3^321-312	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	26.1	UDV737				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Pierce’s disease	Pdr1	14	26.6	VVIn64	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	RIAZ et al. (2008)
Guignardia bidwellii	Rgb1	14	26.7	GF14-42	GF.V3125	x	BOERNER	BOERNER		REX et al. (2014)
Berry size (berry weight)	Be size	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)	Only one major QTL for berry size is indicated. There are several other QTLs described in the literature.
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	CHARDONNAY	x	BIANCA	BIANCA		BELLIN et al. (2009)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3	18	26.9	VMC7f2	REGENT	x	RED GLOBE	REGENT		VAN HEERDEN et al. (2014)	Regent and Bianca descend from Seibel 4614 (=Rpv3^299-279 = Rpv3-1)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	VILLARD BLANC	V. RUPESTRIS	ZYPRIAN et al. (2016)
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.9	GF18-08	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42	V. RUPESTRIS or V. LINECUMII	ZYPRIAN et al. (2016)
Erysiphe necator	Ren2	14	26.9	CS25	HORIZON	x	ILLINOIS 547-1	ILLINOIS 547-1		DALBO et al. (2001)
Erysiphe necator	Ren4	18	26.9	VMC7f2	C166-043	x	F8909-08	C166-043	V. ROMANETTI	RIAZ et al. (2011)
Erysiphe necator	Ren4	18	26.9	SNPs	C87-41	x	B70-57	C87-41	V. ROMANETTI	MAHANIL et al. (2012)
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	resistant tissue: Cane
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	A90-71	x	FLAME SEEDLESS	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Leaf, Cane, Rachis, Fruit
Erysiphe (Uncinula) necator	Run2.2	18	26.9	VMC7f2	e2-9	x	MALAGA ROSADA	TRAYSHED	M. ROTUNDIFOLIA	RIAZ et al. (2011)
Seedlessness	SdI	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seed development inhibitor	SdI	18	26.9	VMC7f2	ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)
Xiphinema index	XiR4	18	29.1	UDV108	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Plasmopara viticola	Rpv19	14	29.5		V. RUPESTRIS B38	x	HORIZON	V. RUPESTRIS B38	V. RUPESTRIS	DIVILOV et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	31.2	S18_31160355	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	34.0	S18_33954011	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics