Loci for Traits in Grapevine Relevant for Breeding and Genetics

Associated markers, their chromosomal localisation, and the donor genotype/species are given. Chromosomal position of a trait/allele is given in megabases according to the 12 x genome sequence of PN40024 (Grape Genome Browser (12X) ).
The symbols were discussed and assigned at the International Conference on Grapevine Breeding and Genetics at Geneva, August 1 - 5, 2010. Follow up information on naming of loci will be provided on VIVC to avoid homonyms.
For updating information please contact: Reinhard Töpfer or Ludger Hausmann

EXCEL Document

Showing 101-174 of 174 items.

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Trait	Symbol	Chr.	Position [Mb]	Associated marker	Parent 1		Parent 2	Genotype of origin	Original species of trait	Reference	Comment

Erysiphe necator	Ren8	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)
Erysiphe necator	Ren9	15	1.4	CenGen6	REGENT	x	LEMBERGER	REGENT		ZENDLER et al. (2017)
Erysiphe necator	Ren10	2	17.9	S2_17854965	MN1264	x	MN1214	SEYVAL BLANC		TEH et al. (2017)
Erysiphe necator	Ren10	2		Haploblock validation	MN1264	x	MN1246	SEYVAL BLANC		TEH et al. (2017)
Erysiphe (Uncinula) necator	Run1	12	13.1	VMC4f3.1	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	BARKER et al. (2005)	powdery mildew resistance originating from Muscaninia should be named as Run...
Erysiphe (Uncinula) necator	Run1	12	20.4	VMC8g9	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	BARKER et al. (2005)	powdery mildew resistance originating from Muscaninia should be named as Run...
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3082-1-42	x	CABERNET SAUVIGNON	VRH3082-1-42	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3176-21-11	x	CABERNET SAUVIGNON	VRH3176-21-11	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3176-21-11	x	CABERNET SAUVIGNON	VRH3176-21-11	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	VRH3161-6-4	x	CABERNET SAUVIGNON	VRH3161-6-4	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	VRH3161-6-4	x	CABERNET SAUVIGNON	VRH3161-6-4	M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.4	49MRP1.P2	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run1	12	16.8	CB53.54	BC1:M. rotundifolia	x	SYRAH		M. ROTUNDIFOLIA	FEECHAN et al. (2013)
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	resistant tissue: Cane
Erysiphe (Uncinula) necator	Run2.1	18	20.9	VMCNg1e3	JB81-107-11	x	CHENIN BLANC	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	23.4	VVIn16	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Rachis
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	JB81-107-11	x	TOKAY	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Fruit
Erysiphe (Uncinula) necator	Run2.1	18	26.9	VMC7f2	A90-71	x	FLAME SEEDLESS	MAGNOLIA	M. ROTUNDIFOLIA	RIAZ et al. (2011)	Leaf, Cane, Rachis, Fruit
Erysiphe (Uncinula) necator	Run2.2	18	26.9	VMC7f2	e2-9	x	MALAGA ROSADA	TRAYSHED	M. ROTUNDIFOLIA	RIAZ et al. (2011)
Seed development inhibitor	SdI	18	25.9	SCC8	MTP2223-27	x	MTP2121-30			DOLIGEZ et al. (2002)
Seedlessness	SdI	18	23.2	VMC6f11	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seedlessness	SdI	18	26.9	VMC7f2	DOMINGA	x	AUTUMN SEEDLESS	AUTUMN SEEDLESS		CABEZAS et al. (2006)
Seed development inhibitor	SdI	18	26.9	VMC7f2	ITALIA	x	BIG PERLON	BIG PERLON		COSTANTINI et al. (2008)
Erysiphe necator	Sen1	9	13.6 - 18.0	S8_19258484	V. RUPESTRIS B38	x	CHARDONNAY	CHARDONNAY	V. VINIFERA	BARBA et al. (2014)
Sex	Sex	2	3.7	VVMD34	HORIZON	x	ILLINOIS 547-1			DALBO et al. (2000)
Sex	Sex	2	4.2	VVS3	RAMSEY	x	RIPARIA GLOIRE
Sex	Sex	2	4.9	VVIb23	V. RUPESTRIS	x	V. ARIZONICA			RIAZ et al. (2006)
Sex	Sex	2	5.0	APT3	GF.V3125	x	BOERNER			FECHTER et al. (2012)
Sex	Sex	2	4.7	SNP4C_1	MOSCATO BIANCO	x	V. RIPARIA WR63			BATTILANA et al. (2013)
Sex	Sex	2	4.9	Vvib23	MUSCAT OTTONEL	x	MALVASIA AROMATICA DI CANDIA			BATTILANA et al. (2013)
Veraison	Ver	16	13.7	VMC1E11	REGENT	x	LEMBERGER	REGENT		FISCHER et al. (2004)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver	16	13.7	VMC1E11	ITALIA	x	BIG PERLON			COSTANTINI et al. (2008)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver1	16	15.8	UDV52	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver1	16		SNP1092P11R	GF.GA-47-42	x	VILLARD BLANC	GF.GA-47-42		ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Veraison	Ver2	18		SPS_P_SNP632GF	GF.GA-47-42	x	VILLARD BLANC			ZYPRIAN et al. (2016)	For véraison (begin of ripening) several QTLs are published. This list here is still incomplete.
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	x	(CABERNET SAUVIGNON X PINOT MEUNIER DWARF)	CABERNET SAUVIGNON		DUNLEVY et al. (2013)
Isobutyl-methoxypyrazine (IBMP)	VvOMT3	3	2.2	VvOMT3	CABERNET SAUVIGNON	x	GLOIRE DE MONTPELLIER	CABERNET SAUVIGNON		GUILLAUMIE et al. (2013)	3 significant QTLs for IBMP content
Xiphinema index	XiR1	19	20.9	VMC5a10	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	XU et al. (2008)
Xiphinema index	XiR1	19	20.9	1N2R3b	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Xiphinema index	XiR1	19		M4F3R	V. RUPESTRIS	x	V. ARIZONICA		V. ARIZONICA	HWANG et al. (2010)
Xiphinema index	XiR2	9		VVBX-A-06	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Xiphinema index	XiR3	10		SC8-03	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Xiphinema index	XiR4	18	29.1	UDV108	VRH8771	x	CABERNET SAUVIGNON	VRH8771		RUBIO et al. (2020)
Anthocyanin 3,5-diglucosides	5-GT	9	6.5		REGENT	x	LEMBERGER	REGENT		HAUSMANN et al. (2009)
Anthocyanin 3,5-diglucosides	5-GT	9	6.5		REGENT	x	LEMBERGER	REGENT		JANVARY et al. (2009)
Colletotrichum gloeosporioides (Glomerella cingulata)	CgR1	14	4.1	np19345	CABERNET SAUVIGNON	x	SHUANGHONG	SHUANGHONG	V. AMURENSIS	FU et al. (2019)	ripe rot
Meloidogyne javanica (root knot nematode)	MjR1	18	31.2	S18_31160355	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Meloidogyne javanica (root knot nematode)	MjR1	18	34.0	S18_33954011	C2-50	x	RIESLING	C2-50	V. CINEREA	SMITH et al. (2018)
Leaf hairs	LH1	5	0.9	Nifts5-50363	MUSCAT OF ALEXANDRIA	x	CAMPBELL EARLY	MUSCAT OF ALEXANDRIA	V. VINIFERA	KONO et al. (2018)	reducing leaf hair density; confers DM susceptibility
Berry skin color	BeCo	2	14.2	MybA1					V. VINIFERA	KOBAYASHI et al. (2004)
Pierce’s disease	Pdr1	14	26.1	UDV095						RIAZ et al. (2008)
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	24.9	UDV305				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.1 (=Rpv3^299-279)	18	26.1	UDV737				SEIBEL 4614	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	24.9	UDV305				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.2 (=Rpv3^null-297)	18	26.1	UDV737				MUNSON (JAEGER 70)	V. RUPESTRIS or V. LINECUMII	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3.3 (=Rpv3^null-271)	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^321-312	18	24.9	UDV305				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^321-312	18	26.1	UDV737				NOAH	V. LABRUSCA or V. RIPARIA	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^361-299	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^361-299	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^299-314	18	24.9	UDV305				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^299-314	18	26.1	UDV737				V. RUPESTRIS GANZIN	V. RUPESTRIS	DI GASPERO et al. (2012)	Pedigree analysis
Plasmopara viticola	Rpv3^null-287	18	24.9	UDV305				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv3^null-287	18	26.1	UDV737				BAYARD (COUDERC 28-112)	V. RUPESTRIS or V. LABRUSCA	DI GASPERO et al. (2012)
Plasmopara viticola	Rpv16									PAP et al. (IN PREPARATION)
Plasmopara viticola	Rpv22									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv23									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv24									JIANG et al. (IN PREPARATION)
Plasmopara viticola	Rpv28
Sex	Sex	2	4.9	VSVV007						PICQ et al. (2014)
Sex	Sex	2	5.0	VSVV010						PICQ et al. (2014)
GA insensitive dwarf mutant	Vvgai1	1	4.9					PINOT MEUNIER

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Vitis International Variety Catalogue VIVC

Loci for Traits in Grapevine Relevant for Breeding and Genetics